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gene exp amigo2 hs05001325 s1  (Thermo Fisher)


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    Structured Review

    Thermo Fisher gene exp amigo2 hs05001325 s1
    Silencing of FKBP5 blunts dexamethasone (DEX)-regulated expression of glucocorticoid response element-containing genes in primary leiomyoma cell cultures. qPCR analysis of mRNA levels for DEX-upregulated genes TSC22D 3 , ADH1B, IL1R1 (A), and DEX-downregulated genes GREM1, IGFBP1, <t>AMIGO2</t> (B) in cultured leiomyoma cells transfected with either control or FKBP5 siRNA for 48 hours and then treated with either vehicle (Cont) or DEX for 24 hours. Bars represent mean ± standard error of the mean, n = 4.
    Gene Exp Amigo2 Hs05001325 S1, supplied by Thermo Fisher, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/amigo2/Gene+Exp%2E+AMIGO2%2C+Hs05001325_s1/pmc12623045-40-80--1
    Average 94 stars, based on 1 article reviews
    gene exp amigo2 hs05001325 s1 - by Bioz Stars, 2026-10
    94/100 stars

    Images

    1) Product Images from "Increased HSD11β1 Expression in Human Leiomyomatous Uteri: Implication for Enhanced Glucocorticoid Signaling"

    Article Title: Increased HSD11β1 Expression in Human Leiomyomatous Uteri: Implication for Enhanced Glucocorticoid Signaling

    Journal: The Journal of Clinical Endocrinology and Metabolism

    doi: 10.1210/clinem/dgaf255

    Silencing of FKBP5 blunts dexamethasone (DEX)-regulated expression of glucocorticoid response element-containing genes in primary leiomyoma cell cultures. qPCR analysis of mRNA levels for DEX-upregulated genes TSC22D 3 , ADH1B, IL1R1 (A), and DEX-downregulated genes GREM1, IGFBP1, AMIGO2 (B) in cultured leiomyoma cells transfected with either control or FKBP5 siRNA for 48 hours and then treated with either vehicle (Cont) or DEX for 24 hours. Bars represent mean ± standard error of the mean, n = 4.
    Figure Legend Snippet: Silencing of FKBP5 blunts dexamethasone (DEX)-regulated expression of glucocorticoid response element-containing genes in primary leiomyoma cell cultures. qPCR analysis of mRNA levels for DEX-upregulated genes TSC22D 3 , ADH1B, IL1R1 (A), and DEX-downregulated genes GREM1, IGFBP1, AMIGO2 (B) in cultured leiomyoma cells transfected with either control or FKBP5 siRNA for 48 hours and then treated with either vehicle (Cont) or DEX for 24 hours. Bars represent mean ± standard error of the mean, n = 4.

    Techniques Used: Expressing, Cell Culture, Transfection, Control

    Related Articles

    other:

    Article Title: AMIGO2 enhances the invasive potential of colorectal cancer by inducing EMT.
    Article Snippet: In our previous studies, we identified amphoterin-inducible gene and open reading frame 2 (AMIGO2) as a driver gene for liver metastasis and found that AMIGO2 expression in cancer cells worsens the prognosis of patients with colorectal cancer (CRC).. Epithelial–mesenchymal transition (EMT) is a trigger for CRC to acquire a malignant phenotype, such as invasive potential, leading to metastasis.. However, the role of AMIGO2 expression in the invasive potential of CRC cells remains unclear.

    Article Title: Increased HSD11β1 Expression in Human Leiomyomatous Uteri: Implication for Enhanced Glucocorticoid Signaling
    Article Snippet: The full name and Taq-Man Probe Assay IDs for each target gene include: FK506-binding protein 5 ( FKBP5 )- Hs01561006_m1; Hydroxysteroid 11-β dehydrogenase 1 ( HSD11B1) - Hs01547870_m1; IL-1 receptor type 1 ( IL1R1 )- Hs00991002_m1; TSC22 domain family member 3 ( TSC22D3 )- Hs00608272_m1; alcohol dehydrogenase 1B, β polypeptide ( ADH1B )- Hs00605175_m1; Gremlin 1, DAN family BMP antagonist ( GREM1 )- Hs00171951_m1; IGF-binding protein 5 ( IGFBP5 )- Hs00181213_m1; adhesion molecule with Ig-like domain 2 ( AMIGO2 )- Hs05001325_s1; laminin subunit alpha 2 ( LAMA2 )- Hs00166308_m1; fibronectin 1 ( FN1 )- Hs00365052_m1; calponin 1 ( CNN1 )- Hs00959434_m1; actin β ( ACTB )- Hs99999903_m1; and glyceraldehyde-3-phosphate dehydrogenase ( GAPDH )- Hs99999905_m1.

    Article Title: The GPR84 molecule is a mediator of a subpopulation of retinal microglia that promote TNF/IL-1α expression via the rho-ROCK pathway after optic nerve injury.
    Article Snippet: Target Company Catalog# Actb Thermo Mm00607939 H2-T23 Thermo Mm00439246 Serping1 Thermo Mm00437835 Ggta1 Thermo Mm00133302 ligp1 Thermo Mm00649928 Gbp2 Thermo Mm00494576 Fbln5 Thermo Mm00488601 Fkbp5 Thermo Mm00487406 Psmb8 Thermo Mm09440207 Amigo2 Thermo Mm00662105 Gpr84 Thermo Mm02620530 Tnf Thermo Mm00443258 Il1α Thermo Mm00439620 Il1β Thermo Mm00434228 Il6 Thermo Mm00446190 SATO ET AL. 2611 10981136, 2023, 11, D ow nloaded from https://onlinelibrary.w iley.com /doi/10.1002/glia.24442 by C ochrane Israel, W iley O nline L ibrary on [16/09/2023].

    Article Title: Polychlorinated biphenyls induce oxidative stress and metabolic responses in astrocytes.
    Article Snippet: Taqman primers/probes as follows: AQP4 (Mm00802131_m1), SLC10A6 (Mm00512730_m1), NOX1 (Mm00549170_m1), C3 (Mm01232779_m1), SOD1 (Mm01344233_g1), AMIGO2 (Mm00662105_s1), GFAP (Mm01253030_1), GSTA2 (Mm00833353_mH), PRDX1 (Mm01621996_s1), 18 s rRNA (HS999999_s1).

    Recombinant:

    Article Title: Irisin reduces amyloid-β by inducing the release of neprilysin from astrocytes following downregulation of ERK-STAT3 signaling.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Anti-mouse IgG, HRP-linked Antibody Cell Signaling Technology Cat# 7076; RRID: AB_330924 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Technology Cat# 7074; RRID: AB_2099233 ChromPure Donkey IgG, whole molecule Jackson immunoresearch Cat# 017-000-003; RRID: AB_2337256 Chemicals, peptides, and recombinant proteins Paraformaldehyde Thermo Fisher Scientific Cat# AA433689L OneMinute Plus WB Stripping Buffer GM bioscience Cat# GM6015 SuperSignal West Femto Maximum Sensitivity Substrate Thermo Fisher Scientific Cat# 34096 RGDS peptide R&D systems Cat# 3498/10 SB273005 Selleck Cat# CS7540 10 His-tag irisin Lake Pharma Kim et al.23 Lysis buffer 6 R&D systems Cat# 895561 RIPA buffer Boston bioproducts Cat# BP-115 L-a-Aminoadipic acid Santa Cruz Cat# SC-202200 b-Amyloid (1-42), HiLyte Fluor 555 Ana Spec Cat# AS-60480-01 Halt Protease/ Phosphatase Inhibitor Cocktail Thermo Scientific Cat# 78440 U0126 Tocris Bioscience Cat# 1144 Corning Cell Recovery Solution Corning Cat# 354253 Corning Matrigel Basement Membrane Matrix Corning Cat# 354234 N-Lauroylsarcosine sodium salt Sigma-Aldrich Cat# L5777 Sacubitril calcium salt Sigma-Aldrich Cat# SML1380 Cal-520, AM AAT Bioquest Cat# 21130 IL-1a recombinant protein Sigma-Aldrich Cat# I3901 TNFa recombinant protein Cell signaling Technology Cat# 8902SF C1q recombinant protein Mybiosource Cat# mbs143105 IL-1b recombinant protein R&D systems Cat# 201-LB IFN-g recombinant protein R&D systems Cat# 285-IF Doxycycline Stemcell technologies Cat# 72742 Critical commercial assays V-PLEX Ab Peptide Panel 1 (4G8) Kit Meso Scale Discovery Cat# K15199E V-PLEX Ab Peptide Panel 1 (6E10) Kit Meso Scale Discovery Cat# K15200E V-PLEX Proinflammatory Panel 1 Human Kit Meso Scale Discovery Cat# K15049D Neprilysin Activity Assay Kit (Fluorometric) Biovision Cat# K487 Insulin Degrading Enzyme Activity Assay Kit Ana Spec Cat# AS-72231 Pierce BCA Protein Assay Kit Thermo Fisher Scientific Cat# 23225 miRNeasy Mini Kit Qiagen Cat# 217004 iScript gDNA Clear cDNA Synthesis Kit BioRad Cat# 1725035 SsoAdvanced Universal Probes Supermix BioRad Cat# 1725282 Promega CytoTox-ONE Homogeneous Membrane Integrity Assay Promega Cat# G7891 Irisin ELISA Phoenix Pharmaceuticals Cat# 067-29 BDNF ELISA R&D systems Cat# SBNT00 Deposited data Raw and processed data files for scRNAseq This paper NCBI-GEO: GSE240161 Raw and processed data files for mass spectrometry This paper iProX: PXD044499 (Continued on next page) Neuron 111, 3619–3633.e1–e8, November 15, 2023 e2 .. REAGENT or RESOURCE SOURCE IDENTIFIER Experimental models: Cell lines ReNcell VM human neural precursor (ReN) cells EMD Millipore Cat# SCC008 Human iPSC-Derived Astrocytes Axol Bioscience Cat# AX0665 Oligonucleotides Nep (Hs00153510_m1) Life Technologies Cat# 4331182 Gfap (Hs00909233_m1) Life Technologies Cat# 4331182 Cp (Hs00236810_m1) Life Technologies Cat# 4331182 Cd44 (Hs01075864_m1) Life Technologies Cat# 4331182 C3 (Hs00163811_m1) Life Technologies Cat# 4331182 Serping1 (Hs00163781_m1) Life Technologies Cat# 4331182 Amigo2 (Hs05001325_s1) Life Technologies Cat# 4331182 Emp1 (Hs00608055_m1) Life Technologies Cat# 4331182 Stat3 (Hs00374280_m1) Life Technologies Cat# 4331182 Gapdh (Hs02786624_g1) Life Technologies Cat# 4331182 Recombinant DNA Inducible ITGB5 shRNA Dharmacon Cat# V3SH7669-229525403 Inducible STAT3 shRNA Dharmacon Cat# V3SH7669 Software and algorithms ImageJ software NIH https://imagej.nih.gov/ij LICOR Image Studio (Version 5.2.5) LI-COR https://www.licor.com GraphPad Prism 9 GraphPad Software https://www.graphpad.com; RRID:SCR_002798 NIS-Elements Advanced Research Software Nikon https://www.microscope.healthcare.nikon.com Gen5 Microplate Reader Software Biotek https://www.biotek.com Discovery Workbench 4.0 Meso Scale Discovery https://www.mesoscale.com ..

    shRNA:

    Article Title: Irisin reduces amyloid-β by inducing the release of neprilysin from astrocytes following downregulation of ERK-STAT3 signaling.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Anti-mouse IgG, HRP-linked Antibody Cell Signaling Technology Cat# 7076; RRID: AB_330924 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Technology Cat# 7074; RRID: AB_2099233 ChromPure Donkey IgG, whole molecule Jackson immunoresearch Cat# 017-000-003; RRID: AB_2337256 Chemicals, peptides, and recombinant proteins Paraformaldehyde Thermo Fisher Scientific Cat# AA433689L OneMinute Plus WB Stripping Buffer GM bioscience Cat# GM6015 SuperSignal West Femto Maximum Sensitivity Substrate Thermo Fisher Scientific Cat# 34096 RGDS peptide R&D systems Cat# 3498/10 SB273005 Selleck Cat# CS7540 10 His-tag irisin Lake Pharma Kim et al.23 Lysis buffer 6 R&D systems Cat# 895561 RIPA buffer Boston bioproducts Cat# BP-115 L-a-Aminoadipic acid Santa Cruz Cat# SC-202200 b-Amyloid (1-42), HiLyte Fluor 555 Ana Spec Cat# AS-60480-01 Halt Protease/ Phosphatase Inhibitor Cocktail Thermo Scientific Cat# 78440 U0126 Tocris Bioscience Cat# 1144 Corning Cell Recovery Solution Corning Cat# 354253 Corning Matrigel Basement Membrane Matrix Corning Cat# 354234 N-Lauroylsarcosine sodium salt Sigma-Aldrich Cat# L5777 Sacubitril calcium salt Sigma-Aldrich Cat# SML1380 Cal-520, AM AAT Bioquest Cat# 21130 IL-1a recombinant protein Sigma-Aldrich Cat# I3901 TNFa recombinant protein Cell signaling Technology Cat# 8902SF C1q recombinant protein Mybiosource Cat# mbs143105 IL-1b recombinant protein R&D systems Cat# 201-LB IFN-g recombinant protein R&D systems Cat# 285-IF Doxycycline Stemcell technologies Cat# 72742 Critical commercial assays V-PLEX Ab Peptide Panel 1 (4G8) Kit Meso Scale Discovery Cat# K15199E V-PLEX Ab Peptide Panel 1 (6E10) Kit Meso Scale Discovery Cat# K15200E V-PLEX Proinflammatory Panel 1 Human Kit Meso Scale Discovery Cat# K15049D Neprilysin Activity Assay Kit (Fluorometric) Biovision Cat# K487 Insulin Degrading Enzyme Activity Assay Kit Ana Spec Cat# AS-72231 Pierce BCA Protein Assay Kit Thermo Fisher Scientific Cat# 23225 miRNeasy Mini Kit Qiagen Cat# 217004 iScript gDNA Clear cDNA Synthesis Kit BioRad Cat# 1725035 SsoAdvanced Universal Probes Supermix BioRad Cat# 1725282 Promega CytoTox-ONE Homogeneous Membrane Integrity Assay Promega Cat# G7891 Irisin ELISA Phoenix Pharmaceuticals Cat# 067-29 BDNF ELISA R&D systems Cat# SBNT00 Deposited data Raw and processed data files for scRNAseq This paper NCBI-GEO: GSE240161 Raw and processed data files for mass spectrometry This paper iProX: PXD044499 (Continued on next page) Neuron 111, 3619–3633.e1–e8, November 15, 2023 e2 .. REAGENT or RESOURCE SOURCE IDENTIFIER Experimental models: Cell lines ReNcell VM human neural precursor (ReN) cells EMD Millipore Cat# SCC008 Human iPSC-Derived Astrocytes Axol Bioscience Cat# AX0665 Oligonucleotides Nep (Hs00153510_m1) Life Technologies Cat# 4331182 Gfap (Hs00909233_m1) Life Technologies Cat# 4331182 Cp (Hs00236810_m1) Life Technologies Cat# 4331182 Cd44 (Hs01075864_m1) Life Technologies Cat# 4331182 C3 (Hs00163811_m1) Life Technologies Cat# 4331182 Serping1 (Hs00163781_m1) Life Technologies Cat# 4331182 Amigo2 (Hs05001325_s1) Life Technologies Cat# 4331182 Emp1 (Hs00608055_m1) Life Technologies Cat# 4331182 Stat3 (Hs00374280_m1) Life Technologies Cat# 4331182 Gapdh (Hs02786624_g1) Life Technologies Cat# 4331182 Recombinant DNA Inducible ITGB5 shRNA Dharmacon Cat# V3SH7669-229525403 Inducible STAT3 shRNA Dharmacon Cat# V3SH7669 Software and algorithms ImageJ software NIH https://imagej.nih.gov/ij LICOR Image Studio (Version 5.2.5) LI-COR https://www.licor.com GraphPad Prism 9 GraphPad Software https://www.graphpad.com; RRID:SCR_002798 NIS-Elements Advanced Research Software Nikon https://www.microscope.healthcare.nikon.com Gen5 Microplate Reader Software Biotek https://www.biotek.com Discovery Workbench 4.0 Meso Scale Discovery https://www.mesoscale.com ..

    Software:

    Article Title: Irisin reduces amyloid-β by inducing the release of neprilysin from astrocytes following downregulation of ERK-STAT3 signaling.
    Article Snippet: REAGENT or RESOURCE SOURCE IDENTIFIER Anti-mouse IgG, HRP-linked Antibody Cell Signaling Technology Cat# 7076; RRID: AB_330924 Anti-rabbit IgG, HRP-linked Antibody Cell Signaling Technology Cat# 7074; RRID: AB_2099233 ChromPure Donkey IgG, whole molecule Jackson immunoresearch Cat# 017-000-003; RRID: AB_2337256 Chemicals, peptides, and recombinant proteins Paraformaldehyde Thermo Fisher Scientific Cat# AA433689L OneMinute Plus WB Stripping Buffer GM bioscience Cat# GM6015 SuperSignal West Femto Maximum Sensitivity Substrate Thermo Fisher Scientific Cat# 34096 RGDS peptide R&D systems Cat# 3498/10 SB273005 Selleck Cat# CS7540 10 His-tag irisin Lake Pharma Kim et al.23 Lysis buffer 6 R&D systems Cat# 895561 RIPA buffer Boston bioproducts Cat# BP-115 L-a-Aminoadipic acid Santa Cruz Cat# SC-202200 b-Amyloid (1-42), HiLyte Fluor 555 Ana Spec Cat# AS-60480-01 Halt Protease/ Phosphatase Inhibitor Cocktail Thermo Scientific Cat# 78440 U0126 Tocris Bioscience Cat# 1144 Corning Cell Recovery Solution Corning Cat# 354253 Corning Matrigel Basement Membrane Matrix Corning Cat# 354234 N-Lauroylsarcosine sodium salt Sigma-Aldrich Cat# L5777 Sacubitril calcium salt Sigma-Aldrich Cat# SML1380 Cal-520, AM AAT Bioquest Cat# 21130 IL-1a recombinant protein Sigma-Aldrich Cat# I3901 TNFa recombinant protein Cell signaling Technology Cat# 8902SF C1q recombinant protein Mybiosource Cat# mbs143105 IL-1b recombinant protein R&D systems Cat# 201-LB IFN-g recombinant protein R&D systems Cat# 285-IF Doxycycline Stemcell technologies Cat# 72742 Critical commercial assays V-PLEX Ab Peptide Panel 1 (4G8) Kit Meso Scale Discovery Cat# K15199E V-PLEX Ab Peptide Panel 1 (6E10) Kit Meso Scale Discovery Cat# K15200E V-PLEX Proinflammatory Panel 1 Human Kit Meso Scale Discovery Cat# K15049D Neprilysin Activity Assay Kit (Fluorometric) Biovision Cat# K487 Insulin Degrading Enzyme Activity Assay Kit Ana Spec Cat# AS-72231 Pierce BCA Protein Assay Kit Thermo Fisher Scientific Cat# 23225 miRNeasy Mini Kit Qiagen Cat# 217004 iScript gDNA Clear cDNA Synthesis Kit BioRad Cat# 1725035 SsoAdvanced Universal Probes Supermix BioRad Cat# 1725282 Promega CytoTox-ONE Homogeneous Membrane Integrity Assay Promega Cat# G7891 Irisin ELISA Phoenix Pharmaceuticals Cat# 067-29 BDNF ELISA R&D systems Cat# SBNT00 Deposited data Raw and processed data files for scRNAseq This paper NCBI-GEO: GSE240161 Raw and processed data files for mass spectrometry This paper iProX: PXD044499 (Continued on next page) Neuron 111, 3619–3633.e1–e8, November 15, 2023 e2 .. REAGENT or RESOURCE SOURCE IDENTIFIER Experimental models: Cell lines ReNcell VM human neural precursor (ReN) cells EMD Millipore Cat# SCC008 Human iPSC-Derived Astrocytes Axol Bioscience Cat# AX0665 Oligonucleotides Nep (Hs00153510_m1) Life Technologies Cat# 4331182 Gfap (Hs00909233_m1) Life Technologies Cat# 4331182 Cp (Hs00236810_m1) Life Technologies Cat# 4331182 Cd44 (Hs01075864_m1) Life Technologies Cat# 4331182 C3 (Hs00163811_m1) Life Technologies Cat# 4331182 Serping1 (Hs00163781_m1) Life Technologies Cat# 4331182 Amigo2 (Hs05001325_s1) Life Technologies Cat# 4331182 Emp1 (Hs00608055_m1) Life Technologies Cat# 4331182 Stat3 (Hs00374280_m1) Life Technologies Cat# 4331182 Gapdh (Hs02786624_g1) Life Technologies Cat# 4331182 Recombinant DNA Inducible ITGB5 shRNA Dharmacon Cat# V3SH7669-229525403 Inducible STAT3 shRNA Dharmacon Cat# V3SH7669 Software and algorithms ImageJ software NIH https://imagej.nih.gov/ij LICOR Image Studio (Version 5.2.5) LI-COR https://www.licor.com GraphPad Prism 9 GraphPad Software https://www.graphpad.com; RRID:SCR_002798 NIS-Elements Advanced Research Software Nikon https://www.microscope.healthcare.nikon.com Gen5 Microplate Reader Software Biotek https://www.biotek.com Discovery Workbench 4.0 Meso Scale Discovery https://www.mesoscale.com ..

    Gene Expression:

    Article Title: The spatial zonation of the murine placental vasculature is specified by epigenetic mechanisms.
    Article Snippet: The following TaqMan gene expression assays were used for murine samples: Mm00607939_S1 (Actb), Mm00483057_m1 (Cav1), Mm03053893_gH (Ccnb1), Mm01171453_m1 (Ccnb2), Mm00432359_m1 (Ccnd1), Mm01135198_m1 (Cd36), Mm01151063_m1 (Dnmt1), Mm00432881_m1 (Dnmt3a), Mm01240113_m1 (Dnmt3b), Mm00475056_m1 (Lyve1), Mm01278617_m1 (Mki67), Mm00448100_g1 (Pcna), Mm01242584_m1 (Pecam1/Cd31), Mm00435613_m1 (Pgf), Mm00477872_m1 (Uhrf1) and Mm01320970_m1 (Vecam1). .. The following TaqMan gene expression assays were used for human samples: Hs00962877_m1 (ACP1), Hs01060665_g1 (ACTB), Hs00969450_g1 (ADM), Hs05001325_s1 (AMIGO2), Hs01048042_m1 (ANGPT2), Hs00270873_s1 (APLNR), Hs01582072_m1 (AURKA), Hs00945858_g1 (AURKB), Hs00186432_m1 (CDC14A), Hs00372920_m1 (CDC14B), Hs00426680_mH (CDC20), Hs00355782_m1 (CDKN1A), Hs00183740_m1 (DKK1), Hs00184092_m1 (DLL4), Hs00945875_m1 (DNMT1), Hs01027162_m1 (DNMT3A), Hs00171876_m1 (DNMT3B), Hs01107363_gH (ETF1), Hs00852949_g1 (HMGA1), Hs00607129_gH (HSPA5), Hs00360439_g1 (KLF2), Hs00272659_m1 (LYVE1), Hs04260396_g1 (MKI67), Hs00427214_g1 (PCNA), Hs00182176_m1 (PGF), Hs01597839_m1 (PRC1), Hs00377726_m1 (PTGS1), Hs00178579_m1 (SMAD6) and Hs00900710_m1 (UNC5B). ..

    Article Title: Rapid Generation of Ventral Spinal Cord-like Astrocytes from Human iPSCs for Modeling Non-Cell Autonomous Mechanisms of Lower Motor Neuron Disease
    Article Snippet: .. Analysis of gene expression was conducted using the following oligonucleotide primers: Taqman probes FOXG1 , Hs01850784_s1; HOXA3 , Hs00601076_m1; HOXA5 , Hs00430330_m1; HOXB8 , Hs00256885_m1; NKX2.2 , Hs00159616_m1; NKX6.1 , Hs00232355_m1; NKX6.2 , Hs00752986_s1; PAX6 , Hs01088114_m1; PAX3 , Hs00240950_m1; PAX7 , Hs00242962_m1; GFAP, Hs00909233_m1 ; S100B , Hs00902901_m1; CD44 , Hs01075864_m1; GJA1 , Hs00748445_s1; SLC1A2 , Hs01102423_m1; SLC1A3/EAAT1/GLAST (EAAT1), Hs00904823_g1; AQUAPORIN-4 (AQP4), Hs00242342_m1; TFAP2A , Hs01029413_m1; REELIN , Hs01022646_m1; POTASSIUM INWARDLY RECTIFYING CHANNEL SUBFAMILY J MEMBER 10 ( KCNJ10 ), Hs00158426_m1; AMIGO2 , Hs00827141_g1; SERGLYCIN , Hs01004159_m1; COMPLEMENT C1S ( C1S ), Hs00156159_m1; COMPLEMENT C3 ( C3 ), Hs00163811_m1; INTERLEUKIN-1BETA ( IL-1β), Hs01555410_m1; TUMOR NECROSIS FACTOR ALPHA (TNF-α), Hs 00174128_m1; C-C MOTIF CHEMOKINE LIGAND 2 ( CCL2 ), Hs00234140_m1; C-X-C MOTIF CHEMOKINE LIGAND 10 ( CXCL10 ), Hs00171042_m1). .. Primer/probe sets were obtained from ThermoFisher Scientific.

    Expressing:

    Article Title: Central TYK2 inhibition identifies TYK2 as a key neuroimmune modulator
    Article Snippet: .. Target Genes Housekeeping Genes Model (Score) Gene (Catalog #) Species Gene (Catalog #) IFN Challenge Mouse Model (ISG Score) Rsad2 (Mm00491265_m1) Mouse Gapdh (Mm99999915_g1) Ifit3 (Mm01704846_s1) Hprt1 (Mm00446968_m1) Cxcl10 (Mm00445235_m1) Hmbs (Mm00660262_g1) Usp18 (Mm01188805_m1) Gusb (Mm00446953_m1) Oasl1 (Mm00455081_m1) Actb (Mm00607939_s1) EAE Mouse Models (ISG Score) Cxcl10 (Mm00445235_m1) Ipo8 (Mm01255158_m1) Isg15 (Mm01705338_s1) Pgk1 (Mm00435617_m1) Ifi30 (Mm00499131_m1) Rplp2 (Mm00782638_s1) Ifi35 (Mm01260550_g1) Tbp (Mm00446973_m1) Ifi44 (Mm00505670_m1) Tfrc (Mm00441941_m1) Ifit1 (Mm00515153_m1) Ubc (Mm01201237_m1) Ifit3 (Mm01704846_s1) Human Gapdh (Hs02786624_g1) Mx1 (Mm00487796_m1) Rpl36al (Hs00733231_m1) Oas1a (Mm00836412_m1) Slc25a3 (Hs00358082_m1) Human iPSCderived Astrocytes (Comprehensive and Reactive Scores) Amigo2 (Hs05001325_s1) Uba52 (Hs02835948_m1) C3 (Hs00163811_m1) Housekeeping genes used to calculate delta-Ct Fbln5 (Hs01056636_m1) Fkbp5 (Hs01561006_m1) Gbp2 (Hs00894837_m1) Hla-a (Hs01058806_g1) Hla-e (Hs03045171_m1) Psmb8 (Hs00544758_m1) Serping1(Hs00163781_ m1) Human iPSCderived Astrocytes (Comprehensive and Interferon Scores) Cxcl10 (Hs00171042_m1) Ifit3 (Hs01922752_s1) Mx1 (Hs00895608_m1) Tspo (Hs00559362_m1) Tubb2a (Hs00742533_s1) SI Table 4: Statistical Analysis for MOG-EAE35-55 Whole Brain IFN mediated mRNA expression. ..



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    Amigo2 Cre Transgenic Mice, supplied by Jackson Laboratory, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Silencing of FKBP5 blunts dexamethasone (DEX)-regulated expression of glucocorticoid response element-containing genes in primary leiomyoma cell cultures. qPCR analysis of mRNA levels for DEX-upregulated genes TSC22D 3 , ADH1B, IL1R1 (A), and DEX-downregulated genes GREM1, IGFBP1, <t>AMIGO2</t> (B) in cultured leiomyoma cells transfected with either control or FKBP5 siRNA for 48 hours and then treated with either vehicle (Cont) or DEX for 24 hours. Bars represent mean ± standard error of the mean, n = 4.
    Amigo2 Cre, supplied by Charles River Laboratories, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Elabscience Biotechnology amigo2
    Transcriptional expression and pathological stage analysis of AMIGO family members in PAAD using GEPIA2 database. (A-B) Comparison of AMIGO1, <t>AMIGO2</t> and AMIGO3 mRNA expression levels between PAAD and normal pancreatic tissues. (C) Expression levels of AMIGOs across different tumor stages in PAAD patients.
    Amigo2, supplied by Elabscience Biotechnology, used in various techniques. Bioz Stars score: 94/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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    Jackson Laboratory amigo2 cre mice
    Transcriptional expression and pathological stage analysis of AMIGO family members in PAAD using GEPIA2 database. (A-B) Comparison of AMIGO1, <t>AMIGO2</t> and AMIGO3 mRNA expression levels between PAAD and normal pancreatic tissues. (C) Expression levels of AMIGOs across different tumor stages in PAAD patients.
    Amigo2 Cre Mice, supplied by Jackson Laboratory, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/amigo2/amigo2+cre+mice/pmc12641031-242-0-5
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    Image Search Results


    Silencing of FKBP5 blunts dexamethasone (DEX)-regulated expression of glucocorticoid response element-containing genes in primary leiomyoma cell cultures. qPCR analysis of mRNA levels for DEX-upregulated genes TSC22D 3 , ADH1B, IL1R1 (A), and DEX-downregulated genes GREM1, IGFBP1, AMIGO2 (B) in cultured leiomyoma cells transfected with either control or FKBP5 siRNA for 48 hours and then treated with either vehicle (Cont) or DEX for 24 hours. Bars represent mean ± standard error of the mean, n = 4.

    Journal: The Journal of Clinical Endocrinology and Metabolism

    Article Title: Increased HSD11β1 Expression in Human Leiomyomatous Uteri: Implication for Enhanced Glucocorticoid Signaling

    doi: 10.1210/clinem/dgaf255

    Figure Lengend Snippet: Silencing of FKBP5 blunts dexamethasone (DEX)-regulated expression of glucocorticoid response element-containing genes in primary leiomyoma cell cultures. qPCR analysis of mRNA levels for DEX-upregulated genes TSC22D 3 , ADH1B, IL1R1 (A), and DEX-downregulated genes GREM1, IGFBP1, AMIGO2 (B) in cultured leiomyoma cells transfected with either control or FKBP5 siRNA for 48 hours and then treated with either vehicle (Cont) or DEX for 24 hours. Bars represent mean ± standard error of the mean, n = 4.

    Article Snippet: The full name and Taq-Man Probe Assay IDs for each target gene include: FK506-binding protein 5 ( FKBP5 )- Hs01561006_m1; Hydroxysteroid 11-β dehydrogenase 1 ( HSD11B1) - Hs01547870_m1; IL-1 receptor type 1 ( IL1R1 )- Hs00991002_m1; TSC22 domain family member 3 ( TSC22D3 )- Hs00608272_m1; alcohol dehydrogenase 1B, β polypeptide ( ADH1B )- Hs00605175_m1; Gremlin 1, DAN family BMP antagonist ( GREM1 )- Hs00171951_m1; IGF-binding protein 5 ( IGFBP5 )- Hs00181213_m1; adhesion molecule with Ig-like domain 2 ( AMIGO2 )- Hs05001325_s1; laminin subunit alpha 2 ( LAMA2 )- Hs00166308_m1; fibronectin 1 ( FN1 )- Hs00365052_m1; calponin 1 ( CNN1 )- Hs00959434_m1; actin β ( ACTB )- Hs99999903_m1; and glyceraldehyde-3-phosphate dehydrogenase ( GAPDH )- Hs99999905_m1.

    Techniques: Expressing, Cell Culture, Transfection, Control

    Transcriptional expression and pathological stage analysis of AMIGO family members in PAAD using GEPIA2 database. (A-B) Comparison of AMIGO1, AMIGO2 and AMIGO3 mRNA expression levels between PAAD and normal pancreatic tissues. (C) Expression levels of AMIGOs across different tumor stages in PAAD patients.

    Journal: International Journal of Medical Sciences

    Article Title: AMIGO2 as a Novel Biomarker Predicting Poor Prognosis and Associated with Adhesion-Driven Metastasis in Pancreatic Adenocarcinoma

    doi: 10.7150/ijms.121794

    Figure Lengend Snippet: Transcriptional expression and pathological stage analysis of AMIGO family members in PAAD using GEPIA2 database. (A-B) Comparison of AMIGO1, AMIGO2 and AMIGO3 mRNA expression levels between PAAD and normal pancreatic tissues. (C) Expression levels of AMIGOs across different tumor stages in PAAD patients.

    Article Snippet: Primary antibodies used in this study included: AMIGO2 (E-AB-10790, Elabscience), E-cadherin (R55-180, BD Biosciences), Vimentin (E-AB-22085, Elabscience), and α-Tubulin (T6199, Sigma-Aldrich).

    Techniques: Expressing, Comparison

    Prognostic value of AMIGO family in pancreatic adenocarcinoma (PAAD) patients. (A) Relapse-free survival (RFS) curves and (B) Overall survival (OS) of AMIGO1, AMIGO2 and AMIGO3 in PAAD.

    Journal: International Journal of Medical Sciences

    Article Title: AMIGO2 as a Novel Biomarker Predicting Poor Prognosis and Associated with Adhesion-Driven Metastasis in Pancreatic Adenocarcinoma

    doi: 10.7150/ijms.121794

    Figure Lengend Snippet: Prognostic value of AMIGO family in pancreatic adenocarcinoma (PAAD) patients. (A) Relapse-free survival (RFS) curves and (B) Overall survival (OS) of AMIGO1, AMIGO2 and AMIGO3 in PAAD.

    Article Snippet: Primary antibodies used in this study included: AMIGO2 (E-AB-10790, Elabscience), E-cadherin (R55-180, BD Biosciences), Vimentin (E-AB-22085, Elabscience), and α-Tubulin (T6199, Sigma-Aldrich).

    Techniques:

    Genetic alterations, gene and protein interaction networks and co-expression analysis of AMIGO family members in pancreatic adenocarcinoma (PAAD). (A-B) Genetic alteration analysis of AMIGO1, AMIGO2 and AMIGO3 in PAAD patients using cBioPortal. (C) Gene-gene interaction (GGI) network of AMIGOs constructed by GeneMANIA. (D) Protein-protein interaction (PPI) network of AMIGOs generated using the STRING database. (E) Co-expression gene analysis of AMIGOs based on the intersection of top 1000 correlated genes, visualized using VENNY.

    Journal: International Journal of Medical Sciences

    Article Title: AMIGO2 as a Novel Biomarker Predicting Poor Prognosis and Associated with Adhesion-Driven Metastasis in Pancreatic Adenocarcinoma

    doi: 10.7150/ijms.121794

    Figure Lengend Snippet: Genetic alterations, gene and protein interaction networks and co-expression analysis of AMIGO family members in pancreatic adenocarcinoma (PAAD). (A-B) Genetic alteration analysis of AMIGO1, AMIGO2 and AMIGO3 in PAAD patients using cBioPortal. (C) Gene-gene interaction (GGI) network of AMIGOs constructed by GeneMANIA. (D) Protein-protein interaction (PPI) network of AMIGOs generated using the STRING database. (E) Co-expression gene analysis of AMIGOs based on the intersection of top 1000 correlated genes, visualized using VENNY.

    Article Snippet: Primary antibodies used in this study included: AMIGO2 (E-AB-10790, Elabscience), E-cadherin (R55-180, BD Biosciences), Vimentin (E-AB-22085, Elabscience), and α-Tubulin (T6199, Sigma-Aldrich).

    Techniques: Expressing, Construct, Generated

    Functional enrichment analysis of AMIGO2 in pancreatic adenocarcinoma (PAAD) by using the DAVID platform. (A-C) Gene Ontology (GO) enrichment analysis of AMIGO2-related genes, categorized into biological processes (BP), cellular components (CC), and molecular functions (MF), respectively. (D) Top 20 GO terms enriched in AMIGO2 co-expressed genes. (E) Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis of AMIGO2-associated genes.

    Journal: International Journal of Medical Sciences

    Article Title: AMIGO2 as a Novel Biomarker Predicting Poor Prognosis and Associated with Adhesion-Driven Metastasis in Pancreatic Adenocarcinoma

    doi: 10.7150/ijms.121794

    Figure Lengend Snippet: Functional enrichment analysis of AMIGO2 in pancreatic adenocarcinoma (PAAD) by using the DAVID platform. (A-C) Gene Ontology (GO) enrichment analysis of AMIGO2-related genes, categorized into biological processes (BP), cellular components (CC), and molecular functions (MF), respectively. (D) Top 20 GO terms enriched in AMIGO2 co-expressed genes. (E) Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis of AMIGO2-associated genes.

    Article Snippet: Primary antibodies used in this study included: AMIGO2 (E-AB-10790, Elabscience), E-cadherin (R55-180, BD Biosciences), Vimentin (E-AB-22085, Elabscience), and α-Tubulin (T6199, Sigma-Aldrich).

    Techniques: Functional Assay

    Journal: International Journal of Medical Sciences

    Article Title: AMIGO2 as a Novel Biomarker Predicting Poor Prognosis and Associated with Adhesion-Driven Metastasis in Pancreatic Adenocarcinoma

    doi: 10.7150/ijms.121794

    Figure Lengend Snippet: The top 20 GO functional enrichment analysis of AMIGO2.

    Article Snippet: Primary antibodies used in this study included: AMIGO2 (E-AB-10790, Elabscience), E-cadherin (R55-180, BD Biosciences), Vimentin (E-AB-22085, Elabscience), and α-Tubulin (T6199, Sigma-Aldrich).

    Techniques: Functional Assay

    Correlation between AMIGO2 and EMT-related transcription factors in PAAD. (A) Protein expression of AMIGO2 in normal pancreatic tissues and PAAD tissues based on immunohistochemistry (IHC) images from the Human Protein Atlas (HPA). Representative IHC staining shows weak or absent AMIGO2 expression in normal pancreatic tissues (left) and stronger staining intensity in PAAD tissues (right). (B-G) Correlation analyses between AMIGO2 and key EMT-related transcription factors in TCGA-PAAD. Scatter plots show the Spearman correlation between AMIGO2 expression and ZEB1 (ρ = 0.27, p = 2.7 × 10⁻⁴), SNAI1 (ρ = 0.23, p = 1.8 × 10⁻³), SP1 (ρ = 0.40, p = 3.6 × 10⁻⁸), NFKB1 (ρ = 0.22, p = 3.8 × 10⁻³), RELA (ρ = 0.41, p = 1.8 × 10⁻⁸) and TWIST1 (ρ = 0.37, p = 4.1 × 10⁻⁷). (H) Correlation between AMIGO2 expression and immune cell infiltration across TCGA cancer types, including pancreatic adenocarcinoma (PAAD), pheochromocytoma and paraganglioma (PCPG), and prostate adenocarcinoma (PRAD), analyzed using TIMER2.0 with tumor purity adjustment. The heatmap displays partial Spearman correlation coefficients across multiple immune deconvolution algorithms. (I) Correlation between AMIGO2 and CD274 (PD-L1) expression in TCGA-PAAD, analyzed using GEPIA2 (Spearman correlation). Scatter plot shows a significant positive correlation (R = 0.34, p = 3.9 × 10⁻⁶), indicating that AMIGO2-high tumors exhibit elevated PD-L1 expression.

    Journal: International Journal of Medical Sciences

    Article Title: AMIGO2 as a Novel Biomarker Predicting Poor Prognosis and Associated with Adhesion-Driven Metastasis in Pancreatic Adenocarcinoma

    doi: 10.7150/ijms.121794

    Figure Lengend Snippet: Correlation between AMIGO2 and EMT-related transcription factors in PAAD. (A) Protein expression of AMIGO2 in normal pancreatic tissues and PAAD tissues based on immunohistochemistry (IHC) images from the Human Protein Atlas (HPA). Representative IHC staining shows weak or absent AMIGO2 expression in normal pancreatic tissues (left) and stronger staining intensity in PAAD tissues (right). (B-G) Correlation analyses between AMIGO2 and key EMT-related transcription factors in TCGA-PAAD. Scatter plots show the Spearman correlation between AMIGO2 expression and ZEB1 (ρ = 0.27, p = 2.7 × 10⁻⁴), SNAI1 (ρ = 0.23, p = 1.8 × 10⁻³), SP1 (ρ = 0.40, p = 3.6 × 10⁻⁸), NFKB1 (ρ = 0.22, p = 3.8 × 10⁻³), RELA (ρ = 0.41, p = 1.8 × 10⁻⁸) and TWIST1 (ρ = 0.37, p = 4.1 × 10⁻⁷). (H) Correlation between AMIGO2 expression and immune cell infiltration across TCGA cancer types, including pancreatic adenocarcinoma (PAAD), pheochromocytoma and paraganglioma (PCPG), and prostate adenocarcinoma (PRAD), analyzed using TIMER2.0 with tumor purity adjustment. The heatmap displays partial Spearman correlation coefficients across multiple immune deconvolution algorithms. (I) Correlation between AMIGO2 and CD274 (PD-L1) expression in TCGA-PAAD, analyzed using GEPIA2 (Spearman correlation). Scatter plot shows a significant positive correlation (R = 0.34, p = 3.9 × 10⁻⁶), indicating that AMIGO2-high tumors exhibit elevated PD-L1 expression.

    Article Snippet: Primary antibodies used in this study included: AMIGO2 (E-AB-10790, Elabscience), E-cadherin (R55-180, BD Biosciences), Vimentin (E-AB-22085, Elabscience), and α-Tubulin (T6199, Sigma-Aldrich).

    Techniques: Expressing, Immunohistochemistry, Staining

    AMIGO2 promotes migration and invasion by inducing EMT in pancreatic cancer cells. (A) Western blot analysis of AMIGO2 protein levels in MiaPaCa-2 cells transfected with two independent AMIGO2 shRNAs (kd-AMIGO2 A1 and kd-AMIGO2 B2) compared with control cells. α-Tubulin served as a loading control. (B) Western blot analysis of EMT markers showing that AMIGO2 knockdown upregulated E-cadherin and downregulated Vimentin expression. α-Tubulin was used as an internal control. (C) Representative images of wound-healing assays performed in MiaPaCa-2 cells after AMIGO2 knockdown, captured at 0, 24, and 48 h. (D) Quantitative analysis of wound closure rates (%) in MiaPaCa-2 control and AMIGO2-silenced cells. (E) Representative images of Transwell invasion assays showing a reduced number of invading cells following AMIGO2 knockdown. (F) Statistical quantification of invaded cell area (%) based on Transwell assays. ***, p<0.01.

    Journal: International Journal of Medical Sciences

    Article Title: AMIGO2 as a Novel Biomarker Predicting Poor Prognosis and Associated with Adhesion-Driven Metastasis in Pancreatic Adenocarcinoma

    doi: 10.7150/ijms.121794

    Figure Lengend Snippet: AMIGO2 promotes migration and invasion by inducing EMT in pancreatic cancer cells. (A) Western blot analysis of AMIGO2 protein levels in MiaPaCa-2 cells transfected with two independent AMIGO2 shRNAs (kd-AMIGO2 A1 and kd-AMIGO2 B2) compared with control cells. α-Tubulin served as a loading control. (B) Western blot analysis of EMT markers showing that AMIGO2 knockdown upregulated E-cadherin and downregulated Vimentin expression. α-Tubulin was used as an internal control. (C) Representative images of wound-healing assays performed in MiaPaCa-2 cells after AMIGO2 knockdown, captured at 0, 24, and 48 h. (D) Quantitative analysis of wound closure rates (%) in MiaPaCa-2 control and AMIGO2-silenced cells. (E) Representative images of Transwell invasion assays showing a reduced number of invading cells following AMIGO2 knockdown. (F) Statistical quantification of invaded cell area (%) based on Transwell assays. ***, p<0.01.

    Article Snippet: Primary antibodies used in this study included: AMIGO2 (E-AB-10790, Elabscience), E-cadherin (R55-180, BD Biosciences), Vimentin (E-AB-22085, Elabscience), and α-Tubulin (T6199, Sigma-Aldrich).

    Techniques: Migration, Western Blot, Transfection, Control, Knockdown, Expressing